/EXTERNAL BLUEPRINT/K011718_1_lane_gembs/EXTERNAL-K011718_1894660_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 60351362 | 100.00 % | 30175681 | 100.00 % | 30175681 | 100.00 % |
| General Reads | 55823404 | 92.50 % | 28042018 | 92.93 % | 27781386 | 92.07 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 4 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4527950 | 7.50 % | 2133659 | 7.07 % | 2394291 | 7.93 % |
| Bisulfite_reads C2T | 28922636 | 47.92 % | 14526246 | 48.14 % | 14396390 | 47.71 % |
| Bisulfite_reads G2A | 26900776 | 44.57 % | 13515776 | 44.79 % | 13385000 | 44.36 % |
| Concept | Value |
|---|---|
| Unique Fragments | 20962403 |
| Average Unique | 69.47 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1631995441 | 35.12 % | 639436417 | 27.52 % | 992559024 | 42.72 % |
| Base Counts Overall C | 680067027 | 14.63 % | 118925701 | 5.12 % | 561141326 | 24.15 % |
| Base Counts Overall G | 692156379 | 14.89 % | 566337870 | 24.37 % | 125818509 | 5.41 % |
| Base Counts Overall T | 1582337604 | 34.05 % | 968611994 | 41.69 % | 613725610 | 26.41 % |
| Base Counts Overall N | 60498423 | 1.30 % | 30215455 | 1.30 % | 30282968 | 1.30 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 25916537 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 30175681 |
| 76 | 30175681 |
| Insert Size Histogram |
|---|
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