/EXTERNAL BLUEPRINT/K011721_1_lane_gembs/EXTERNAL-K011721_1894663_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 55919492 | 100.00 % | 27959746 | 100.00 % | 27959746 | 100.00 % |
| General Reads | 53281068 | 95.28 % | 26761073 | 95.71 % | 26519995 | 94.85 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2638424 | 4.72 % | 1198673 | 4.29 % | 1439751 | 5.15 % |
| Bisulfite_reads C2T | 27597647 | 49.35 % | 13859254 | 49.57 % | 13738393 | 49.14 % |
| Bisulfite_reads G2A | 25683421 | 45.93 % | 12901819 | 46.14 % | 12781602 | 45.71 % |
| Concept | Value |
|---|---|
| Unique Fragments | 20073611 |
| Average Unique | 71.79 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1530430785 | 35.54 % | 588316742 | 27.33 % | 942114043 | 43.76 % |
| Base Counts Overall C | 611482605 | 14.20 % | 84104310 | 3.91 % | 527378295 | 24.50 % |
| Base Counts Overall G | 623427889 | 14.48 % | 530539695 | 24.64 % | 92888194 | 4.31 % |
| Base Counts Overall T | 1484407781 | 34.47 % | 921944199 | 42.82 % | 562463582 | 26.13 % |
| Base Counts Overall N | 56051824 | 1.30 % | 27995496 | 1.30 % | 28056328 | 1.30 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 24797406 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 27959746 |
| 76 | 27959746 |
| Insert Size Histogram |
|---|
 |