/EXTERNAL BLUEPRINT/K011725_1_lane_gembs/EXTERNAL-K011725_1894667_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 102937836 | 100.00 % | 51468918 | 100.00 % | 51468918 | 100.00 % |
| General Reads | 97319058 | 94.54 % | 48997558 | 95.20 % | 48321500 | 93.88 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 0 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5618777 | 5.46 % | 2471360 | 4.80 % | 3147417 | 6.12 % |
| Bisulfite_reads C2T | 50323734 | 48.89 % | 25329769 | 49.21 % | 24993965 | 48.56 % |
| Bisulfite_reads G2A | 46995325 | 45.65 % | 23667789 | 45.98 % | 23327536 | 45.32 % |
| Concept | Value |
|---|---|
| Unique Fragments | 36489098 |
| Average Unique | 70.90 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2805274150 | 35.39 % | 1083646577 | 27.34 % | 1721627573 | 43.44 % |
| Base Counts Overall C | 1122437445 | 14.16 % | 132652180 | 3.35 % | 989785265 | 24.97 % |
| Base Counts Overall G | 1158143829 | 14.61 % | 993563183 | 25.07 % | 164580646 | 4.15 % |
| Base Counts Overall T | 2736668592 | 34.53 % | 1701527556 | 42.93 % | 1035141036 | 26.12 % |
| Base Counts Overall N | 103689356 | 1.31 % | 51717190 | 1.30 % | 51972166 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 45013354 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 51468918 |
| 76 | 51468918 |
| Insert Size Histogram |
|---|
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