/EXTERNAL BLUEPRINT/K011728_K011737_K011738_K011739_K011740_K011741_K011742_K011743_K011744_K011768_K011769_11_lane_gembs/EXTERNAL-K011728_1894670_2
BACK
SAMPLE K011728_K011737_K011738_K011739_K011740_K011741_K011742_K011743_K011744_K011768_K011769_11_lane_gembs LANE EXTERNAL-K011728_1894670_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 112888478 | 100.00 % | 56444239 | 100.00 % | 56444239 | 100.00 % |
| General Reads | 108218771 | 95.86 % | 54606727 | 96.74 % | 53612044 | 94.98 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 18 | 0.00 % | 9 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4669689 | 4.14 % | 1837503 | 3.26 % | 2832186 | 5.02 % |
| Bisulfite_reads C2T | 55880397 | 49.50 % | 28188388 | 49.94 % | 27692009 | 49.06 % |
| Bisulfite_reads G2A | 52338392 | 46.36 % | 26418348 | 46.80 % | 25920044 | 45.92 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 41584539 |
| Average Unique | 73.67 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 3114447931 | 36.30 % | 1200709076 | 27.99 % | 1913738855 | 44.61 % |
| Base Counts Overall C | 1121171101 | 13.07 % | 107526822 | 2.51 % | 1013644279 | 23.63 % |
| Base Counts Overall G | 1185155278 | 13.81 % | 1046267335 | 24.39 % | 138887943 | 3.24 % |
| Base Counts Overall T | 3040488190 | 35.44 % | 1878688203 | 43.79 % | 1161799987 | 27.08 % |
| Base Counts Overall N | 118261828 | 1.38 % | 56570728 | 1.32 % | 61691100 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 51450047 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 56444239 |
| 75 | 56444239 |
Insert Size Plot
| Insert Size Histogram |
 |