/EXTERNAL BLUEPRINT/K011728_K011737_K011738_K011739_K011740_K011741_K011742_K011743_K011744_K011768_K011769_11_lane_gembs/EXTERNAL-K011737_1894679_2
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SAMPLE K011728_K011737_K011738_K011739_K011740_K011741_K011742_K011743_K011744_K011768_K011769_11_lane_gembs LANE EXTERNAL-K011737_1894679_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 11180086 | 100.00 % | 5590043 | 100.00 % | 5590043 | 100.00 % |
| General Reads | 7540172 | 67.44 % | 3819285 | 68.32 % | 3720887 | 66.56 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3639912 | 32.56 % | 1770757 | 31.68 % | 1869155 | 33.44 % |
| Bisulfite_reads C2T | 3897357 | 34.86 % | 1973444 | 35.30 % | 1923913 | 34.42 % |
| Bisulfite_reads G2A | 3642817 | 32.58 % | 1845842 | 33.02 % | 1796975 | 32.15 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 2896502 |
| Average Unique | 51.82 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 270986662 | 31.89 % | 112372248 | 26.45 % | 158614414 | 37.33 % |
| Base Counts Overall C | 144370576 | 16.99 % | 42702128 | 10.05 % | 101668448 | 23.93 % |
| Base Counts Overall G | 152339475 | 17.93 % | 105065933 | 24.73 % | 47273542 | 11.13 % |
| Base Counts Overall T | 270267287 | 31.81 % | 159100282 | 37.45 % | 111167005 | 26.17 % |
| Base Counts Overall N | 11722536 | 1.38 % | 5602677 | 1.32 % | 6119859 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 3608390 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 5590043 |
| 75 | 5590043 |
Insert Size Plot
| Insert Size Histogram |
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