/EXTERNAL BLUEPRINT/K011728_K011737_K011738_K011739_K011740_K011741_K011742_K011743_K011744_K011768_K011769_11_lane_gembs/EXTERNAL-K011742_1894684_2
BACK
SAMPLE K011728_K011737_K011738_K011739_K011740_K011741_K011742_K011743_K011744_K011768_K011769_11_lane_gembs LANE EXTERNAL-K011742_1894684_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 14664978 | 100.00 % | 7332489 | 100.00 % | 7332489 | 100.00 % |
| General Reads | 11518001 | 78.54 % | 5826519 | 79.46 % | 5691482 | 77.62 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 0 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3146976 | 21.46 % | 1505970 | 20.54 % | 1641006 | 22.38 % |
| Bisulfite_reads C2T | 5946729 | 40.55 % | 3007416 | 41.01 % | 2939313 | 40.09 % |
| Bisulfite_reads G2A | 5571273 | 37.99 % | 2819103 | 38.45 % | 2752170 | 37.53 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 4463043 |
| Average Unique | 60.87 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 363516420 | 32.62 % | 151394266 | 27.17 % | 212122154 | 38.06 % |
| Base Counts Overall C | 180781062 | 16.22 % | 48473760 | 8.70 % | 132307302 | 23.74 % |
| Base Counts Overall G | 191633440 | 17.19 % | 136923681 | 24.57 % | 54709759 | 9.82 % |
| Base Counts Overall T | 363254286 | 32.59 % | 213128649 | 38.25 % | 150125637 | 26.94 % |
| Base Counts Overall N | 15353120 | 1.38 % | 7348808 | 1.32 % | 8004312 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 5532324 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 7332489 |
| 75 | 7332489 |
Insert Size Plot
| Insert Size Histogram |
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