/EXTERNAL BLUEPRINT/K011728_K011737_K011738_K011739_K011740_K011741_K011742_K011743_K011744_K011768_K011769_11_lane_gembs/EXTERNAL-K011768_1894710_2
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SAMPLE K011728_K011737_K011738_K011739_K011740_K011741_K011742_K011743_K011744_K011768_K011769_11_lane_gembs LANE EXTERNAL-K011768_1894710_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 40296512 | 100.00 % | 20148256 | 100.00 % | 20148256 | 100.00 % |
| General Reads | 34659126 | 86.01 % | 17517551 | 86.94 % | 17141575 | 85.08 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5637384 | 13.99 % | 2630704 | 13.06 % | 3006680 | 14.92 % |
| Bisulfite_reads C2T | 17884902 | 44.38 % | 9036742 | 44.85 % | 8848160 | 43.92 % |
| Bisulfite_reads G2A | 16774226 | 41.63 % | 8480810 | 42.09 % | 8293416 | 41.16 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 13279836 |
| Average Unique | 65.91 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1047679870 | 34.21 % | 417124831 | 27.24 % | 630555039 | 41.18 % |
| Base Counts Overall C | 453028820 | 14.79 % | 88765637 | 5.80 % | 364263183 | 23.79 % |
| Base Counts Overall G | 479246516 | 15.65 % | 375145024 | 24.50 % | 104101492 | 6.80 % |
| Base Counts Overall T | 1040353628 | 33.97 % | 630039074 | 41.14 % | 410314554 | 26.80 % |
| Base Counts Overall N | 42226078 | 1.38 % | 20192890 | 1.32 % | 22033188 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 16560038 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 20148256 |
| 75 | 20148256 |
Insert Size Plot
| Insert Size Histogram |
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