/EXTERNAL BLUEPRINT/K011728_K011737_K011738_K011739_K011740_K011741_K011742_K011743_K011744_K011768_K011769_11_lane_gembs/EXTERNAL-K011769_1894711_2
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SAMPLE K011728_K011737_K011738_K011739_K011740_K011741_K011742_K011743_K011744_K011768_K011769_11_lane_gembs LANE EXTERNAL-K011769_1894711_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 51076218 | 100.00 % | 25538109 | 100.00 % | 25538109 | 100.00 % |
| General Reads | 48578461 | 95.11 % | 24537915 | 96.08 % | 24040546 | 94.14 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2497757 | 4.89 % | 1000194 | 3.92 % | 1497563 | 5.86 % |
| Bisulfite_reads C2T | 25039901 | 49.02 % | 12645021 | 49.51 % | 12394880 | 48.53 % |
| Bisulfite_reads G2A | 23538560 | 46.09 % | 11892894 | 46.57 % | 11645666 | 45.60 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 18950203 |
| Average Unique | 74.20 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1310350944 | 33.76 % | 546942955 | 28.18 % | 763407989 | 39.33 % |
| Base Counts Overall C | 590166567 | 15.20 % | 159152889 | 8.20 % | 431013678 | 22.21 % |
| Base Counts Overall G | 621593415 | 16.01 % | 446290184 | 22.99 % | 175303231 | 9.03 % |
| Base Counts Overall T | 1306151787 | 33.65 % | 762913967 | 39.31 % | 543237820 | 27.99 % |
| Base Counts Overall N | 53529855 | 1.38 % | 25596289 | 1.32 % | 27933566 | 1.44 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 23361441 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 25538109 |
| 75 | 25538109 |
Insert Size Plot
| Insert Size Histogram |
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