/EXTERNAL BLUEPRINT/K010402_K010403_K010404_K010405_K010406_K010407_K010408_K010409_K010410_K010411_K010412_11_lane_gembs/EXTERNAL-K010402_1798644_2
BACK
SAMPLE K010402_K010403_K010404_K010405_K010406_K010407_K010408_K010409_K010410_K010411_K010412_11_lane_gembs LANE EXTERNAL-K010402_1798644_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 102471434 | 100.00 % | 51235717 | 100.00 % | 51235717 | 100.00 % |
| General Reads | 98070948 | 95.71 % | 49657575 | 96.92 % | 48413373 | 94.49 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 5 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4400476 | 4.29 % | 1578137 | 3.08 % | 2822339 | 5.51 % |
| Bisulfite_reads C2T | 50718198 | 49.49 % | 25672835 | 50.11 % | 25045363 | 48.88 % |
| Bisulfite_reads G2A | 47352760 | 46.21 % | 23984745 | 46.81 % | 23368015 | 45.61 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 36860847 |
| Average Unique | 71.94 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 2819554801 | 36.20 % | 1090918810 | 28.02 % | 1728635991 | 44.39 % |
| Base Counts Overall C | 1020835206 | 13.11 % | 105597437 | 2.71 % | 915237769 | 23.50 % |
| Base Counts Overall G | 1094731623 | 14.06 % | 945770228 | 24.29 % | 148961395 | 3.83 % |
| Base Counts Overall T | 2746965338 | 35.27 % | 1700203358 | 43.66 % | 1046761980 | 26.88 % |
| Base Counts Overall N | 105742016 | 1.36 % | 51424659 | 1.32 % | 54317357 | 1.39 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 45838337 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 51235717 |
| 75 | 51235717 |
Insert Size Plot
| Insert Size Histogram |
 |