/EXTERNAL BLUEPRINT/K010402_K010403_K010404_K010405_K010406_K010407_K010408_K010409_K010410_K010411_K010412_11_lane_gembs/EXTERNAL-K010412_1798654_2
BACK
SAMPLE K010402_K010403_K010404_K010405_K010406_K010407_K010408_K010409_K010410_K010411_K010412_11_lane_gembs LANE EXTERNAL-K010412_1798654_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 47266396 | 100.00 % | 23633198 | 100.00 % | 23633198 | 100.00 % |
| General Reads | 42620433 | 90.17 % | 21588382 | 91.35 % | 21032051 | 88.99 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22 | 0.00 % | 11 | 0.00 % | 11 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4645941 | 9.83 % | 2044805 | 8.65 % | 2601136 | 11.01 % |
| Bisulfite_reads C2T | 22012353 | 46.57 % | 11146135 | 47.16 % | 10866218 | 45.98 % |
| Bisulfite_reads G2A | 20608102 | 43.60 % | 10442258 | 44.18 % | 10165844 | 43.02 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 16194054 |
| Average Unique | 68.52 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 1260818125 | 35.10 % | 501098496 | 27.90 % | 759719629 | 42.30 % |
| Base Counts Overall C | 501279942 | 13.95 % | 77518998 | 4.32 % | 423760944 | 23.59 % |
| Base Counts Overall G | 536675638 | 14.94 % | 439533418 | 24.47 % | 97142220 | 5.41 % |
| Base Counts Overall T | 1244689879 | 34.65 % | 754249491 | 41.99 % | 490440388 | 27.31 % |
| Base Counts Overall N | 48782512 | 1.36 % | 23722645 | 1.32 % | 25059867 | 1.40 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 20159800 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 75 | 23633198 |
| 75 | 23633198 |
Insert Size Plot
| Insert Size Histogram |
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