/EXTERNAL BLUEPRINT/K010402_K010403_K010404_K010405_K010406_K010407_K010408_K010409_K010410_K010411_K010412_11_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 318599946 | 100.00 % | 159299973 | 100.00 % | 159299973 | 100.00 % |
| General Reads | 275874359 | 86.59 % | 139814929 | 87.77 % | 136059430 | 85.41 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 368 | 0.00 % | 187 | 0.00 % | 181 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 42725219 | 13.41 % | 19484857 | 12.23 % | 23240362 | 14.59 % |
| Bisulfite_reads C2T | 142536159 | 44.74 % | 72212722 | 45.33 % | 70323437 | 44.15 % |
| Bisulfite_reads G2A | 133338568 | 41.85 % | 67602394 | 42.44 % | 65736174 | 41.27 % |
| Concept | Value |
|---|---|
| Unique Fragments | 104563106 |
| Average Unique | 65.64 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 8358382821 | 34.52 % | 3346377386 | 27.64 % | 5012005435 | 41.40 % |
| Base Counts Overall C | 3513222500 | 14.51 % | 677180976 | 5.59 % | 2836041524 | 23.43 % |
| Base Counts Overall G | 3782127908 | 15.62 % | 2947104735 | 24.34 % | 835023173 | 6.90 % |
| Base Counts Overall T | 8231041350 | 33.99 % | 4976238222 | 41.10 % | 3254803128 | 26.88 % |
| Base Counts Overall N | 328821317 | 1.36 % | 159896629 | 1.32 % | 168924688 | 1.40 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.614921038904958 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 130203226 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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