/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011803_1894745_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16667828 | 100.00 % | 8333914 | 100.00 % | 8333914 | 100.00 % |
| General Reads | 11450695 | 68.70 % | 5751556 | 69.01 % | 5699139 | 68.38 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 18 | 0.00 % | 9 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5217115 | 31.30 % | 2582349 | 30.99 % | 2634766 | 31.61 % |
| Bisulfite_reads C2T | 5919965 | 35.52 % | 2972596 | 35.67 % | 2947369 | 35.37 % |
| Bisulfite_reads G2A | 5530748 | 33.18 % | 2778969 | 33.35 % | 2751779 | 33.02 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4318052 |
| Average Unique | 51.81 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 407476703 | 31.75 % | 171389911 | 26.71 % | 236086792 | 36.79 % |
| Base Counts Overall C | 224929447 | 17.53 % | 71502735 | 11.14 % | 153426712 | 23.91 % |
| Base Counts Overall G | 228616124 | 17.81 % | 153901156 | 23.98 % | 74714968 | 11.64 % |
| Base Counts Overall T | 405529980 | 31.60 % | 236518519 | 36.86 % | 169011461 | 26.34 % |
| Base Counts Overall N | 16870502 | 1.31 % | 8399057 | 1.31 % | 8471445 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5340023 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8333914 |
| 76 | 8333914 |
| Insert Size Histogram |
|---|
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