/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011804_1894746_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 8413838 | 100.00 % | 4206919 | 100.00 % | 4206919 | 100.00 % |
| General Reads | 4847719 | 57.62 % | 2435572 | 57.89 % | 2412147 | 57.34 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3566119 | 42.38 % | 1771347 | 42.11 % | 1794772 | 42.66 % |
| Bisulfite_reads C2T | 2503231 | 29.75 % | 1257291 | 29.89 % | 1245940 | 29.62 % |
| Bisulfite_reads G2A | 2344488 | 27.86 % | 1178281 | 28.01 % | 1166207 | 27.72 % |
| Concept | Value |
|---|---|
| Unique Fragments | 1846141 |
| Average Unique | 43.88 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 197131407 | 30.43 % | 84983362 | 26.23 % | 112148045 | 34.62 % |
| Base Counts Overall C | 121150485 | 18.70 % | 44131555 | 13.62 % | 77018930 | 23.78 % |
| Base Counts Overall G | 124017340 | 19.14 % | 77918270 | 24.05 % | 46099070 | 14.23 % |
| Base Counts Overall T | 197048518 | 30.42 % | 112658955 | 34.78 % | 84389563 | 26.05 % |
| Base Counts Overall N | 8517776 | 1.31 % | 4240621 | 1.31 % | 4277155 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 2277571 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 4206919 |
| 76 | 4206919 |
| Insert Size Histogram |
|---|
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