/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011805_1894747_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 24439904 | 100.00 % | 12219952 | 100.00 % | 12219952 | 100.00 % |
| General Reads | 21893946 | 89.58 % | 10980367 | 89.86 % | 10913579 | 89.31 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2545958 | 10.42 % | 1239585 | 10.14 % | 1306373 | 10.69 % |
| Bisulfite_reads C2T | 11433409 | 46.78 % | 5732129 | 46.91 % | 5701280 | 46.66 % |
| Bisulfite_reads G2A | 10460537 | 42.80 % | 5248238 | 42.95 % | 5212299 | 42.65 % |
| Concept | Value |
|---|---|
| Unique Fragments | 7421351 |
| Average Unique | 60.73 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 555895721 | 29.54 % | 261593544 | 27.80 % | 294302177 | 31.28 % |
| Base Counts Overall C | 370474287 | 19.69 % | 187522804 | 19.93 % | 182951483 | 19.44 % |
| Base Counts Overall G | 381873705 | 20.29 % | 186586741 | 19.83 % | 195286964 | 20.75 % |
| Base Counts Overall T | 548875596 | 29.17 % | 292910424 | 31.13 % | 255965172 | 27.20 % |
| Base Counts Overall N | 24753299 | 1.32 % | 12322791 | 1.31 % | 12430508 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 9651281 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12219952 |
| 76 | 12219952 |
| Insert Size Histogram |
|---|
 |