/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011809_1894751_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 11450034 | 100.00 % | 5725017 | 100.00 % | 5725017 | 100.00 % |
| General Reads | 6078926 | 53.09 % | 3058288 | 53.42 % | 3020638 | 52.76 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5371106 | 46.91 % | 2666728 | 46.58 % | 2704378 | 47.24 % |
| Bisulfite_reads C2T | 3138613 | 27.41 % | 1578499 | 27.57 % | 1560114 | 27.25 % |
| Bisulfite_reads G2A | 2940315 | 25.68 % | 1479790 | 25.85 % | 1460525 | 25.51 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2316924 |
| Average Unique | 40.47 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 251219833 | 28.49 % | 116714515 | 26.48 % | 134505318 | 30.51 % |
| Base Counts Overall C | 182299660 | 20.68 % | 78904015 | 17.90 % | 103395645 | 23.45 % |
| Base Counts Overall G | 186867963 | 21.20 % | 105198675 | 23.86 % | 81669288 | 18.53 % |
| Base Counts Overall T | 249678324 | 28.32 % | 134240066 | 30.45 % | 115438258 | 26.19 % |
| Base Counts Overall N | 11586838 | 1.31 % | 5769038 | 1.31 % | 5817800 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 2856688 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 5725017 |
| 76 | 5725017 |
| Insert Size Histogram |
|---|
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