/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011827_1894769_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 32910934 | 100.00 % | 16455467 | 100.00 % | 16455467 | 100.00 % |
| General Reads | 12838134 | 39.01 % | 6446904 | 39.18 % | 6391230 | 38.84 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 106 | 0.00 % | 46 | 0.00 % | 60 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 20072694 | 60.99 % | 10008517 | 60.82 % | 10064177 | 61.16 % |
| Bisulfite_reads C2T | 6623953 | 20.13 % | 3325944 | 20.21 % | 3298009 | 20.04 % |
| Bisulfite_reads G2A | 6214287 | 18.88 % | 3121006 | 18.97 % | 3093281 | 18.80 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4988376 |
| Average Unique | 30.31 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 670213320 | 26.45 % | 312064958 | 24.63 % | 358148362 | 28.27 % |
| Base Counts Overall C | 574941251 | 22.69 % | 263309911 | 20.78 % | 311631340 | 24.59 % |
| Base Counts Overall G | 590033072 | 23.28 % | 318922706 | 25.17 % | 271110366 | 21.40 % |
| Base Counts Overall T | 665689828 | 26.27 % | 356057896 | 28.10 % | 309631932 | 24.44 % |
| Base Counts Overall N | 33264447 | 1.31 % | 16715488 | 1.32 % | 16548959 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6118118 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 16455467 |
| 76 | 16455467 |
| Insert Size Histogram |
|---|
 |