/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011829_1894771_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18306396 | 100.00 % | 9153198 | 100.00 % | 9153198 | 100.00 % |
| General Reads | 8398499 | 45.88 % | 4213824 | 46.04 % | 4184675 | 45.72 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22 | 0.00 % | 11 | 0.00 % | 11 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9907875 | 54.12 % | 4939363 | 53.96 % | 4968512 | 54.28 % |
| Bisulfite_reads C2T | 4336781 | 23.69 % | 2175537 | 23.77 % | 2161244 | 23.61 % |
| Bisulfite_reads G2A | 4061740 | 22.19 % | 2038298 | 22.27 % | 2023442 | 22.11 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3288662 |
| Average Unique | 35.93 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 390225813 | 27.68 % | 180375495 | 25.59 % | 209850318 | 29.77 % |
| Base Counts Overall C | 303300738 | 21.52 % | 134897025 | 19.14 % | 168403713 | 23.89 % |
| Base Counts Overall G | 308868028 | 21.91 % | 170687767 | 24.22 % | 138180261 | 19.61 % |
| Base Counts Overall T | 388670254 | 27.57 % | 209522606 | 29.73 % | 179147648 | 25.42 % |
| Base Counts Overall N | 18527659 | 1.31 % | 9313353 | 1.32 % | 9214306 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4019538 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9153198 |
| 76 | 9153198 |
| Insert Size Histogram |
|---|
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