/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011830_1894772_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 26686108 | 100.00 % | 13343054 | 100.00 % | 13343054 | 100.00 % |
| General Reads | 7934052 | 29.73 % | 3982917 | 29.85 % | 3951135 | 29.61 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 33 | 0.00 % | 16 | 0.00 % | 17 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 18752023 | 70.27 % | 9360121 | 70.15 % | 9391902 | 70.39 % |
| Bisulfite_reads C2T | 4100760 | 15.37 % | 2058363 | 15.43 % | 2042397 | 15.31 % |
| Bisulfite_reads G2A | 3833325 | 14.36 % | 1924570 | 14.42 % | 1908755 | 14.31 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3035796 |
| Average Unique | 22.75 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 548181006 | 26.68 % | 258059627 | 25.12 % | 290121379 | 28.24 % |
| Base Counts Overall C | 461264853 | 22.45 % | 214036747 | 20.83 % | 247228106 | 24.06 % |
| Base Counts Overall G | 472010902 | 22.97 % | 251781505 | 24.51 % | 220229397 | 21.44 % |
| Base Counts Overall T | 546371965 | 26.59 % | 289965107 | 28.22 % | 256406858 | 24.96 % |
| Base Counts Overall N | 27001590 | 1.31 % | 13572172 | 1.32 % | 13429418 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3746447 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13343054 |
| 76 | 13343054 |
| Insert Size Histogram |
|---|
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