/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011832_1894774_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 24257456 | 100.00 % | 12128728 | 100.00 % | 12128728 | 100.00 % |
| General Reads | 8644744 | 35.64 % | 4339943 | 35.78 % | 4304801 | 35.49 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 5 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15612702 | 64.36 % | 7788780 | 64.22 % | 7823922 | 64.51 % |
| Bisulfite_reads C2T | 4472238 | 18.44 % | 2244726 | 18.51 % | 2227512 | 18.37 % |
| Bisulfite_reads G2A | 4172516 | 17.20 % | 2095222 | 17.27 % | 2077294 | 17.13 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3305959 |
| Average Unique | 27.26 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 489917259 | 26.23 % | 227898504 | 24.40 % | 262018755 | 28.06 % |
| Base Counts Overall C | 428950712 | 22.97 % | 196770455 | 21.07 % | 232180257 | 24.86 % |
| Base Counts Overall G | 439141775 | 23.51 % | 236462537 | 25.32 % | 202679238 | 21.70 % |
| Base Counts Overall T | 485286771 | 25.98 % | 260453743 | 27.89 % | 224833028 | 24.07 % |
| Base Counts Overall N | 24527595 | 1.31 % | 12326817 | 1.32 % | 12200778 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4087473 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12128728 |
| 76 | 12128728 |
| Insert Size Histogram |
|---|
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