/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011833_1894775_2

BACK

SAMPLE K011800_K011850_33libs_33_lane_gembs LANE EXTERNAL-K011833_1894775_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 16520438 100.00 % 8260219 100.00 % 8260219 100.00 %
General Reads 5761729 34.88 % 2892877 35.02 % 2868852 34.73 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 34 0.00 % 17 0.00 % 17 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 10758675 65.12 % 5367325 64.98 % 5391350 65.27 %
Bisulfite_reads C2T 2969863 17.98 % 1491210 18.05 % 1478653 17.90 %
Bisulfite_reads G2A 2791900 16.90 % 1401684 16.97 % 1390216 16.83 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 2230991
Average Unique 27.01 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 331926253 26.09 % 154715484 24.32 % 177210769 27.86 %
Base Counts Overall C 294027809 23.11 % 135729513 21.34 % 158298296 24.89 %
Base Counts Overall G 300771170 23.64 % 160839332 25.29 % 139931838 22.00 %
Base Counts Overall T 328574830 25.83 % 176316377 27.72 % 152258453 23.94 %
Base Counts Overall N 16773664 1.32 % 8436157 1.33 % 8337507 1.31 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 2742012



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K011833_1894775_2.mapq.png



Read Length

Read Length Reads
76 8260219
76 8260219



Insert Size Plot

Insert Size Histogram
EXTERNAL-K011833_1894775_2.isize.png