/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011834_1894776_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 83968598 | 100.00 % | 41984299 | 100.00 % | 41984299 | 100.00 % |
| General Reads | 77331507 | 92.10 % | 38785448 | 92.38 % | 38546059 | 91.81 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 23 | 0.00 % | 9 | 0.00 % | 14 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6637068 | 7.90 % | 3198842 | 7.62 % | 3438226 | 8.19 % |
| Bisulfite_reads C2T | 39776216 | 47.37 % | 19946272 | 47.51 % | 19829944 | 47.23 % |
| Bisulfite_reads G2A | 37555314 | 44.73 % | 18839185 | 44.87 % | 18716129 | 44.58 % |
| Concept | Value |
|---|---|
| Unique Fragments | 31238855 |
| Average Unique | 74.41 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1855973343 | 28.71 % | 961901171 | 29.75 % | 894072172 | 27.66 % |
| Base Counts Overall C | 1323662257 | 20.47 % | 684063101 | 21.16 % | 639599156 | 19.78 % |
| Base Counts Overall G | 1342515670 | 20.76 % | 649154182 | 20.08 % | 693361488 | 21.45 % |
| Base Counts Overall T | 1858466155 | 28.74 % | 894965639 | 27.68 % | 963500516 | 29.80 % |
| Base Counts Overall N | 84964621 | 1.31 % | 42706930 | 1.32 % | 42257691 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 37583689 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 41984299 |
| 76 | 41984299 |
| Insert Size Histogram |
|---|
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