/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011836_1894778_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 20340956 | 100.00 % | 10170478 | 100.00 % | 10170478 | 100.00 % |
| General Reads | 11129067 | 54.71 % | 5589310 | 54.96 % | 5539757 | 54.47 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 4 | 0.00 % | 2 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9211885 | 45.29 % | 4581166 | 45.04 % | 4630719 | 45.53 % |
| Bisulfite_reads C2T | 5725454 | 28.15 % | 2874817 | 28.27 % | 2850637 | 28.03 % |
| Bisulfite_reads G2A | 5403617 | 26.57 % | 2714495 | 26.69 % | 2689122 | 26.44 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4413996 |
| Average Unique | 43.40 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 418605546 | 26.73 % | 202021406 | 25.80 % | 216584140 | 27.66 % |
| Base Counts Overall C | 353107307 | 22.54 % | 167871210 | 21.44 % | 185236097 | 23.65 % |
| Base Counts Overall G | 360508767 | 23.02 % | 188356543 | 24.05 % | 172152224 | 21.98 % |
| Base Counts Overall T | 413443970 | 26.40 % | 214527354 | 27.39 % | 198916616 | 25.40 % |
| Base Counts Overall N | 20588022 | 1.31 % | 10350293 | 1.32 % | 10237729 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5370356 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 10170478 |
| 76 | 10170478 |
| Insert Size Histogram |
|---|
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