/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011837_1894779_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 23965170 | 100.00 % | 11982585 | 100.00 % | 11982585 | 100.00 % |
| General Reads | 8258326 | 34.46 % | 4144880 | 34.59 % | 4113446 | 34.33 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 55 | 0.00 % | 27 | 0.00 % | 28 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15706789 | 65.54 % | 7837678 | 65.41 % | 7869111 | 65.67 % |
| Bisulfite_reads C2T | 4253080 | 17.75 % | 2134235 | 17.81 % | 2118845 | 17.68 % |
| Bisulfite_reads G2A | 4005301 | 16.71 % | 2010672 | 16.78 % | 1994629 | 16.65 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3196421 |
| Average Unique | 26.68 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 478088305 | 25.91 % | 227089781 | 24.61 % | 250998524 | 27.20 % |
| Base Counts Overall C | 428549554 | 23.22 % | 201565913 | 21.85 % | 226983641 | 24.60 % |
| Base Counts Overall G | 438723800 | 23.77 % | 230939735 | 25.03 % | 207784065 | 22.52 % |
| Base Counts Overall T | 475707191 | 25.78 % | 250873893 | 27.19 % | 224833298 | 24.37 % |
| Base Counts Overall N | 24249240 | 1.31 % | 12189723 | 1.32 % | 12059517 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3936893 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11982585 |
| 76 | 11982585 |
| Insert Size Histogram |
|---|
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