/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011838_1894780_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 25928120 | 100.00 % | 12964060 | 100.00 % | 12964060 | 100.00 % |
| General Reads | 7475280 | 28.83 % | 3751346 | 28.94 % | 3723934 | 28.73 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12 | 0.00 % | 4 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 18452828 | 71.17 % | 9212710 | 71.06 % | 9240118 | 71.27 % |
| Bisulfite_reads C2T | 3915500 | 15.10 % | 1964309 | 15.15 % | 1951191 | 15.05 % |
| Bisulfite_reads G2A | 3559792 | 13.73 % | 1787041 | 13.78 % | 1772751 | 13.67 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2798718 |
| Average Unique | 21.59 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 529864421 | 26.54 % | 255553511 | 25.60 % | 274310910 | 27.48 % |
| Base Counts Overall C | 450904934 | 22.59 % | 214505987 | 21.49 % | 236398947 | 23.68 % |
| Base Counts Overall G | 461797369 | 23.13 % | 240987534 | 24.14 % | 220809835 | 22.12 % |
| Base Counts Overall T | 527680636 | 26.43 % | 274006436 | 27.45 % | 253674200 | 25.41 % |
| Base Counts Overall N | 26217880 | 1.31 % | 13179152 | 1.32 % | 13038728 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3536029 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12964060 |
| 76 | 12964060 |
| Insert Size Histogram |
|---|
 |