/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011839_1894781_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 23670282 | 100.00 % | 11835141 | 100.00 % | 11835141 | 100.00 % |
| General Reads | 14932542 | 63.09 % | 7491213 | 63.30 % | 7441329 | 62.87 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16 | 0.00 % | 3 | 0.00 % | 13 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8737724 | 36.91 % | 4343925 | 36.70 % | 4393799 | 37.13 % |
| Bisulfite_reads C2T | 7680996 | 32.45 % | 3852551 | 32.55 % | 3828445 | 32.35 % |
| Bisulfite_reads G2A | 7251562 | 30.64 % | 3638665 | 30.74 % | 3612897 | 30.53 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5947039 |
| Average Unique | 50.25 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 498945064 | 27.38 % | 246238394 | 27.02 % | 252706670 | 27.73 % |
| Base Counts Overall C | 396742762 | 21.77 % | 195333856 | 21.43 % | 201408906 | 22.10 % |
| Base Counts Overall G | 403633461 | 22.15 % | 204666143 | 22.46 % | 198967318 | 21.83 % |
| Base Counts Overall T | 499291935 | 27.39 % | 253000417 | 27.76 % | 246291518 | 27.03 % |
| Base Counts Overall N | 23998492 | 1.32 % | 12067047 | 1.32 % | 11931445 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7216319 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11835141 |
| 76 | 11835141 |
| Insert Size Histogram |
|---|
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