/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011841_1894783_2

BACK

SAMPLE K011800_K011850_33libs_33_lane_gembs LANE EXTERNAL-K011841_1894783_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 23900352 100.00 % 11950176 100.00 % 11950176 100.00 %
General Reads 9632059 40.30 % 4834257 40.45 % 4797802 40.15 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 14268293 59.70 % 7115919 59.55 % 7152374 59.85 %
Bisulfite_reads C2T 4965144 20.77 % 2491692 20.85 % 2473452 20.70 %
Bisulfite_reads G2A 4666915 19.53 % 2342565 19.60 % 2324350 19.45 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 3779390
Average Unique 31.63 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 478866752 26.02 % 229548764 24.95 % 249317988 27.09 %
Base Counts Overall C 425887465 23.14 % 202893014 22.05 % 222994451 24.23 %
Base Counts Overall G 436004484 23.69 % 227041911 24.67 % 208962573 22.71 %
Base Counts Overall T 475380503 25.83 % 248521856 27.01 % 226858647 24.65 %
Base Counts Overall N 24187900 1.31 % 12158007 1.32 % 12029893 1.31 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 4624096



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K011841_1894783_2.mapq.png



Read Length

Read Length Reads
76 11950176
76 11950176



Insert Size Plot

Insert Size Histogram
EXTERNAL-K011841_1894783_2.isize.png