/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011843_1894785_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 23125074 | 100.00 % | 11562537 | 100.00 % | 11562537 | 100.00 % |
| General Reads | 17584316 | 76.04 % | 8856817 | 76.60 % | 8727499 | 75.48 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 5 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5540748 | 23.96 % | 2705715 | 23.40 % | 2835033 | 24.52 % |
| Bisulfite_reads C2T | 9016118 | 38.99 % | 4539864 | 39.26 % | 4476254 | 38.71 % |
| Bisulfite_reads G2A | 8568208 | 37.05 % | 4316958 | 37.34 % | 4251250 | 36.77 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6974326 |
| Average Unique | 60.32 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 503139931 | 28.26 % | 255100101 | 28.65 % | 248039830 | 27.86 % |
| Base Counts Overall C | 371933836 | 20.89 % | 180173478 | 20.24 % | 191760358 | 21.54 % |
| Base Counts Overall G | 378842259 | 21.28 % | 196220185 | 22.04 % | 182622074 | 20.51 % |
| Base Counts Overall T | 503347430 | 28.27 % | 247079150 | 27.75 % | 256268280 | 28.78 % |
| Base Counts Overall N | 23367242 | 1.31 % | 11742435 | 1.32 % | 11624807 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 8516880 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11562537 |
| 76 | 11562537 |
| Insert Size Histogram |
|---|
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