/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011844_1894786_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 26854580 | 100.00 % | 13427290 | 100.00 % | 13427290 | 100.00 % |
| General Reads | 9759792 | 36.34 % | 4899614 | 36.49 % | 4860178 | 36.20 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 24 | 0.00 % | 8 | 0.00 % | 16 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 17094764 | 63.66 % | 8527668 | 63.51 % | 8567096 | 63.80 % |
| Bisulfite_reads C2T | 5042739 | 18.78 % | 2531252 | 18.85 % | 2511487 | 18.70 % |
| Bisulfite_reads G2A | 4717077 | 17.57 % | 2368370 | 17.64 % | 2348707 | 17.49 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3811775 |
| Average Unique | 28.39 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 538238648 | 26.03 % | 263555559 | 25.49 % | 274683089 | 26.57 % |
| Base Counts Overall C | 478888770 | 23.16 % | 233936086 | 22.63 % | 244952684 | 23.69 % |
| Base Counts Overall G | 490358899 | 23.71 % | 249776083 | 24.16 % | 240582816 | 23.27 % |
| Base Counts Overall T | 533169019 | 25.78 % | 272990519 | 26.40 % | 260178500 | 25.16 % |
| Base Counts Overall N | 27147324 | 1.31 % | 13643083 | 1.32 % | 13504241 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4662201 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 13427290 |
| 76 | 13427290 |
| Insert Size Histogram |
|---|
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