/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011845_1894787_2

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SAMPLE K011800_K011850_33libs_33_lane_gembs LANE EXTERNAL-K011845_1894787_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 30889206 100.00 % 15444603 100.00 % 15444603 100.00 %
General Reads 16836362 54.51 % 8450147 54.71 % 8386215 54.30 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 26 0.00 % 13 0.00 % 13 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 14052818 45.49 % 6994443 45.29 % 7058375 45.70 %
Bisulfite_reads C2T 8675457 28.09 % 4353211 28.19 % 4322246 27.99 %
Bisulfite_reads G2A 8160931 26.42 % 4096949 26.53 % 4063982 26.31 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 6556390
Average Unique 42.45 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 654239088 27.51 % 315341156 26.52 % 338897932 28.50 %
Base Counts Overall C 517254099 21.75 % 249756433 21.00 % 267497666 22.49 %
Base Counts Overall G 531513056 22.35 % 274714628 23.10 % 256798428 21.59 %
Base Counts Overall T 644232598 27.09 % 333725719 28.06 % 310506879 26.11 %
Base Counts Overall N 31230021 1.31 % 15696495 1.32 % 15533526 1.31 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate NA
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 8045000



Mapping Quality

Mapping Quality Histogram
EXTERNAL-K011845_1894787_2.mapq.png



Read Length

Read Length Reads
76 15444603
76 15444603



Insert Size Plot

Insert Size Histogram
EXTERNAL-K011845_1894787_2.isize.png