/EXTERNAL BLUEPRINT/K011800_K011850_33libs_33_lane_gembs/EXTERNAL-K011847_1894789_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 24857504 | 100.00 % | 12428752 | 100.00 % | 12428752 | 100.00 % |
| General Reads | 7878833 | 31.70 % | 3957554 | 31.84 % | 3921279 | 31.55 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 58 | 0.00 % | 29 | 0.00 % | 29 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 16978613 | 68.30 % | 8471169 | 68.16 % | 8507444 | 68.45 % |
| Bisulfite_reads C2T | 4078627 | 16.41 % | 2048372 | 16.48 % | 2030255 | 16.34 % |
| Bisulfite_reads G2A | 3800264 | 15.29 % | 1909211 | 15.36 % | 1891053 | 15.22 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3003183 |
| Average Unique | 24.16 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 512153928 | 26.76 % | 233494715 | 24.40 % | 278659213 | 29.12 % |
| Base Counts Overall C | 428264181 | 22.38 % | 188458993 | 19.69 % | 239805188 | 25.06 % |
| Base Counts Overall G | 440116321 | 22.99 % | 245448379 | 25.65 % | 194667942 | 20.34 % |
| Base Counts Overall T | 508323457 | 26.56 % | 276958685 | 28.94 % | 231364772 | 24.18 % |
| Base Counts Overall N | 25169921 | 1.32 % | 12653132 | 1.32 % | 12516789 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3726193 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 12428752 |
| 76 | 12428752 |
| Insert Size Histogram |
|---|
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