/EXTERNAL BLUEPRINT/K011802_K011819_K011820_K011821_K011822_K011823_K011824_K011825_K011826_K011853_K011854_11_lane_gembs/EXTERNAL-K011802_1894744_2
BACK
SAMPLE K011802_K011819_K011820_K011821_K011822_K011823_K011824_K011825_K011826_K011853_K011854_11_lane_gembs LANE EXTERNAL-K011802_1894744_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 126938692 | 100.00 % | 63469346 | 100.00 % | 63469346 | 100.00 % |
| General Reads | 121332539 | 95.58 % | 60926093 | 95.99 % | 60406446 | 95.17 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2 | 0.00 % | 1 | 0.00 % | 1 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5606151 | 4.42 % | 2543252 | 4.01 % | 3062899 | 4.83 % |
| Bisulfite_reads C2T | 62791448 | 49.47 % | 31521823 | 49.66 % | 31269625 | 49.27 % |
| Bisulfite_reads G2A | 58541093 | 46.12 % | 29404271 | 46.33 % | 29136822 | 45.91 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 46111888 |
| Average Unique | 72.65 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 3525081184 | 36.06 % | 1346302820 | 27.55 % | 2178778364 | 44.58 % |
| Base Counts Overall C | 1313699096 | 13.44 % | 137389566 | 2.81 % | 1176309530 | 24.07 % |
| Base Counts Overall G | 1354771813 | 13.86 % | 1194468312 | 24.44 % | 160303501 | 3.28 % |
| Base Counts Overall T | 3452352730 | 35.32 % | 2144738440 | 43.89 % | 1307614290 | 26.76 % |
| Base Counts Overall N | 128374461 | 1.31 % | 64240504 | 1.31 % | 64133957 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 56842231 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 63469346 |
| 76 | 63469346 |
Insert Size Plot
| Insert Size Histogram |
 |