/EXTERNAL BLUEPRINT/K011802_K011819_K011820_K011821_K011822_K011823_K011824_K011825_K011826_K011853_K011854_11_lane_gembs/EXTERNAL-K011821_1894763_2
BACK
SAMPLE K011802_K011819_K011820_K011821_K011822_K011823_K011824_K011825_K011826_K011853_K011854_11_lane_gembs LANE EXTERNAL-K011821_1894763_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 22394752 | 100.00 % | 11197376 | 100.00 % | 11197376 | 100.00 % |
| General Reads | 17573681 | 78.47 % | 8831767 | 78.87 % | 8741914 | 78.07 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 20 | 0.00 % | 10 | 0.00 % | 10 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4821051 | 21.53 % | 2365599 | 21.13 % | 2455452 | 21.93 % |
| Bisulfite_reads C2T | 9078474 | 40.54 % | 4561187 | 40.73 % | 4517287 | 40.34 % |
| Bisulfite_reads G2A | 8495227 | 37.93 % | 4270590 | 38.14 % | 4224637 | 37.73 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 6771015 |
| Average Unique | 60.47 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 574115372 | 33.29 % | 232078861 | 26.92 % | 342036511 | 39.67 % |
| Base Counts Overall C | 273165049 | 15.84 % | 69197851 | 8.03 % | 203967198 | 23.66 % |
| Base Counts Overall G | 283369759 | 16.43 % | 208410135 | 24.17 % | 74959624 | 8.69 % |
| Base Counts Overall T | 571099699 | 33.12 % | 341178734 | 39.57 % | 229920965 | 26.67 % |
| Base Counts Overall N | 22646025 | 1.31 % | 11332371 | 1.31 % | 11313654 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 8348778 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 11197376 |
| 76 | 11197376 |
Insert Size Plot
| Insert Size Histogram |
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