/EXTERNAL BLUEPRINT/K011930_K011935_K011936_K011937_4_lane_gembs/EXTERNAL-K011936_1894878_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 19028228 | 100.00 % | 9514114 | 100.00 % | 9514114 | 100.00 % |
| General Reads | 12841906 | 67.49 % | 6463427 | 67.94 % | 6378479 | 67.04 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 5 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6186312 | 32.51 % | 3050682 | 32.06 % | 3135630 | 32.96 % |
| Bisulfite_reads C2T | 6646484 | 34.93 % | 3344423 | 35.15 % | 3302061 | 34.71 % |
| Bisulfite_reads G2A | 6195432 | 32.56 % | 3119009 | 32.78 % | 3076423 | 32.34 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4901499 |
| Average Unique | 51.52 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 461537135 | 31.50 % | 200509337 | 27.37 % | 261027798 | 35.63 % |
| Base Counts Overall C | 259240657 | 17.69 % | 89541624 | 12.22 % | 169699033 | 23.16 % |
| Base Counts Overall G | 265369421 | 18.11 % | 171966299 | 23.47 % | 93403122 | 12.75 % |
| Base Counts Overall T | 459786856 | 31.38 % | 260936688 | 35.62 % | 198850168 | 27.14 % |
| Base Counts Overall N | 19239487 | 1.31 % | 9632830 | 1.31 % | 9606657 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6079936 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 9514114 |
| 76 | 9514114 |
| Insert Size Histogram |
|---|
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