/EXTERNAL BLUEPRINT/K011930_K011935_K011936_K011937_4_lane_gembs/EXTERNAL-K011937_1894879_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 21865148 | 100.00 % | 10932574 | 100.00 % | 10932574 | 100.00 % |
| General Reads | 16877589 | 77.19 % | 8482984 | 77.59 % | 8394605 | 76.79 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 3 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4987553 | 22.81 % | 2449587 | 22.41 % | 2537966 | 23.21 % |
| Bisulfite_reads C2T | 8715479 | 39.86 % | 4380025 | 40.06 % | 4335454 | 39.66 % |
| Bisulfite_reads G2A | 8162116 | 37.33 % | 4102962 | 37.53 % | 4059154 | 37.13 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6505842 |
| Average Unique | 59.51 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 561984470 | 33.38 % | 227821135 | 27.06 % | 334163335 | 39.70 % |
| Base Counts Overall C | 267993235 | 15.92 % | 70912249 | 8.42 % | 197080986 | 23.41 % |
| Base Counts Overall G | 276779575 | 16.44 % | 201040590 | 23.88 % | 75738985 | 9.00 % |
| Base Counts Overall T | 554743872 | 32.95 % | 330961686 | 39.32 % | 223782186 | 26.58 % |
| Base Counts Overall N | 22115244 | 1.31 % | 11072538 | 1.32 % | 11042706 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 8029108 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 10932574 |
| 76 | 10932574 |
| Insert Size Histogram |
|---|
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