/EXTERNAL BLUEPRINT/methylation/K011930_K011935_K011936_K011937_4_lane_gembs
BACK
SAMPLE K011930_K011935_K011936_K011937_4_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
15335324 |
10163 |
0.07 % |
| NonRefCpG |
861458 |
20 |
0.00 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
2907055 |
15.47 % |
918 |
3.55 % |
261941 |
26.61 % |
14 |
10.63 % |
| Intermediate (0.3-0.7) |
6704882 |
35.67 % |
4740 |
18.35 % |
369027 |
37.49 % |
33 |
24.05 % |
| Methylated (0.7-1) |
9185031 |
48.86 % |
20170 |
78.09 % |
353439 |
35.90 % |
91 |
65.32 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.690 |
|
0.870 |
|
0.560 |
|
0.810 |
|