/EXTERNAL BLUEPRINT/K011929_K011931_K011932_K011933_K011934_5_lane_gembs/EXTERNAL-K011934_1894876_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 10510756 | 100.00 % | 5255378 | 100.00 % | 5255378 | 100.00 % |
| General Reads | 7008311 | 66.68 % | 3532480 | 67.22 % | 3475831 | 66.14 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3502445 | 33.32 % | 1722898 | 32.78 % | 1779547 | 33.86 % |
| Bisulfite_reads C2T | 3612669 | 34.37 % | 1820357 | 34.64 % | 1792312 | 34.10 % |
| Bisulfite_reads G2A | 3395642 | 32.31 % | 1712123 | 32.58 % | 1683519 | 32.03 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2660762 |
| Average Unique | 50.63 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 262159664 | 32.39 % | 105932013 | 26.18 % | 156227651 | 38.61 % |
| Base Counts Overall C | 136061743 | 16.81 % | 37560254 | 9.28 % | 98501489 | 24.34 % |
| Base Counts Overall G | 139369739 | 17.22 % | 99927881 | 24.69 % | 39441858 | 9.75 % |
| Base Counts Overall T | 261094916 | 32.26 % | 155953846 | 38.54 % | 105141070 | 25.98 % |
| Base Counts Overall N | 10642150 | 1.31 % | 5290112 | 1.31 % | 5352038 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3285106 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 5255378 |
| 76 | 5255378 |
| Insert Size Histogram |
|---|
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