/EXTERNAL BLUEPRINT/methylation/K011929_K011931_K011932_K011933_K011934_5_lane_gembs
BACK
SAMPLE K011929_K011931_K011932_K011933_K011934_5_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
15649624 |
8667 |
0.06 % |
| NonRefCpG |
887335 |
17 |
0.00 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
2988159 |
15.36 % |
732 |
3.21 % |
272159 |
26.57 % |
8 |
6.50 % |
| Intermediate (0.3-0.7) |
6983525 |
35.90 % |
4258 |
18.65 % |
385281 |
37.61 % |
28 |
22.75 % |
| Methylated (0.7-1) |
9479016 |
48.73 % |
17845 |
78.14 % |
367016 |
35.83 % |
89 |
70.75 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.680 |
|
0.860 |
|
0.560 |
|
0.830 |
|