/EXTERNAL BLUEPRINT/K011857_K011872_K011873_K011874_K011875_K011876_K011877_K011878_K011879_K011921_K011922_11_lane_gembs/EXTERNAL-K011857_1894799_2
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SAMPLE K011857_K011872_K011873_K011874_K011875_K011876_K011877_K011878_K011879_K011921_K011922_11_lane_gembs LANE EXTERNAL-K011857_1894799_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 106613482 | 100.00 % | 53306741 | 100.00 % | 53306741 | 100.00 % |
| General Reads | 99631685 | 93.45 % | 50655607 | 95.03 % | 48976078 | 91.88 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8 | 0.00 % | 4 | 0.00 % | 4 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6981789 | 6.55 % | 2651130 | 4.97 % | 4330659 | 8.12 % |
| Bisulfite_reads C2T | 51364329 | 48.18 % | 26104576 | 48.97 % | 25259753 | 47.39 % |
| Bisulfite_reads G2A | 48267364 | 45.27 % | 24551035 | 46.06 % | 23716329 | 44.49 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 37666601 |
| Average Unique | 70.66 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 2949023412 | 35.92 % | 1147545791 | 27.96 % | 1801477621 | 43.89 % |
| Base Counts Overall C | 1110031953 | 13.52 % | 142109193 | 3.46 % | 967922760 | 23.58 % |
| Base Counts Overall G | 1167074753 | 14.22 % | 1001273011 | 24.39 % | 165801742 | 4.04 % |
| Base Counts Overall T | 2875793151 | 35.03 % | 1759984495 | 42.88 % | 1115808656 | 27.18 % |
| Base Counts Overall N | 107314845 | 1.31 % | 53706567 | 1.31 % | 53608278 | 1.31 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 46388169 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 53306741 |
| 76 | 53306741 |
Insert Size Plot
| Insert Size Histogram |
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