/EXTERNAL BLUEPRINT/K011859_K011888_K011889_K011890_K011891_K011892_K011893_K011925_K011926_9_lane_gembs/EXTERNAL-K011889_1894831_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 22823508 | 100.00 % | 11411754 | 100.00 % | 11411754 | 100.00 % |
| General Reads | 15569466 | 68.22 % | 7846712 | 68.76 % | 7722754 | 67.67 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 3 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7254036 | 31.78 % | 3565039 | 31.24 % | 3688997 | 32.33 % |
| Bisulfite_reads C2T | 8026237 | 35.17 % | 4044018 | 35.44 % | 3982219 | 34.90 % |
| Bisulfite_reads G2A | 7543235 | 33.05 % | 3802697 | 33.32 % | 3740538 | 32.78 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6068021 |
| Average Unique | 53.17 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 524911621 | 29.87 % | 235898594 | 26.85 % | 289013027 | 32.89 % |
| Base Counts Overall C | 337679046 | 19.21 % | 134085210 | 15.26 % | 203593836 | 23.17 % |
| Base Counts Overall G | 345380416 | 19.65 % | 206755699 | 23.53 % | 138624717 | 15.78 % |
| Base Counts Overall T | 526409819 | 29.95 % | 290410719 | 33.05 % | 235999100 | 26.86 % |
| Base Counts Overall N | 23029214 | 1.31 % | 11554836 | 1.31 % | 11474378 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7449981 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 11411754 |
| 76 | 11411754 |
| Insert Size Histogram |
|---|
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