/EXTERNAL BLUEPRINT/K011859_K011888_K011889_K011890_K011891_K011892_K011893_K011925_K011926_9_lane_gembs/EXTERNAL-K011893_1894835_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 17978442 | 100.00 % | 8989221 | 100.00 % | 8989221 | 100.00 % |
| General Reads | 10941235 | 60.86 % | 5541676 | 61.65 % | 5399559 | 60.07 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7037207 | 39.14 % | 3447545 | 38.35 % | 3589662 | 39.93 % |
| Bisulfite_reads C2T | 5638635 | 31.36 % | 2855099 | 31.76 % | 2783536 | 30.97 % |
| Bisulfite_reads G2A | 5302600 | 29.49 % | 2686577 | 29.89 % | 2616023 | 29.10 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4229567 |
| Average Unique | 47.05 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 399724327 | 28.87 % | 185337797 | 26.78 % | 214386530 | 30.97 % |
| Base Counts Overall C | 281091995 | 20.31 % | 122134246 | 17.65 % | 158957749 | 22.97 % |
| Base Counts Overall G | 285964118 | 20.66 % | 162111456 | 23.42 % | 123852662 | 17.89 % |
| Base Counts Overall T | 399423399 | 28.85 % | 213487600 | 30.84 % | 185935799 | 26.86 % |
| Base Counts Overall N | 18136195 | 1.31 % | 9098918 | 1.31 % | 9037277 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5216153 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8989221 |
| 76 | 8989221 |
| Insert Size Histogram |
|---|
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