/EXTERNAL BLUEPRINT/K011859_K011888_K011889_K011890_K011891_K011892_K011893_K011925_K011926_9_lane_gembs/EXTERNAL-K011926_1894868_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 48730516 | 100.00 % | 24365258 | 100.00 % | 24365258 | 100.00 % |
| General Reads | 31929302 | 65.52 % | 16132812 | 66.21 % | 15796490 | 64.83 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 25 | 0.00 % | 12 | 0.00 % | 13 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 16801189 | 34.48 % | 8232434 | 33.79 % | 8568755 | 35.17 % |
| Bisulfite_reads C2T | 16430694 | 33.72 % | 8299561 | 34.06 % | 8131133 | 33.37 % |
| Bisulfite_reads G2A | 15498633 | 31.80 % | 7833263 | 32.15 % | 7665370 | 31.46 % |
| Concept | Value |
|---|---|
| Unique Fragments | 12343885 |
| Average Unique | 50.66 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1142192450 | 30.44 % | 502111661 | 26.76 % | 640080789 | 34.12 % |
| Base Counts Overall C | 700699457 | 18.67 % | 257024636 | 13.70 % | 443674821 | 23.65 % |
| Base Counts Overall G | 715836875 | 19.08 % | 450277785 | 24.00 % | 265559090 | 14.15 % |
| Base Counts Overall T | 1144369987 | 30.50 % | 642058041 | 34.22 % | 502311946 | 26.77 % |
| Base Counts Overall N | 49150963 | 1.31 % | 24652743 | 1.31 % | 24498220 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 15182564 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 24365258 |
| 76 | 24365258 |
| Insert Size Histogram |
|---|
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