/EXTERNAL BLUEPRINT/K011859_K011888_K011889_K011890_K011891_K011892_K011893_K011925_K011926_9_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 250329414 | 100.00 % | 125164707 | 100.00 % | 125164707 | 100.00 % |
| General Reads | 155217706 | 62.01 % | 78251724 | 62.52 % | 76965982 | 61.49 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 93 | 0.00 % | 45 | 0.00 % | 48 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 95111615 | 37.99 % | 46912938 | 37.48 % | 48198677 | 38.51 % |
| Bisulfite_reads C2T | 79969053 | 31.95 % | 40305183 | 32.20 % | 39663870 | 31.69 % |
| Bisulfite_reads G2A | 75248746 | 30.06 % | 37946586 | 30.32 % | 37302160 | 29.80 % |
| Concept | Value |
|---|---|
| Unique Fragments | 59943470 |
| Average Unique | 47.89 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 5684835993 | 29.49 % | 2582731008 | 26.80 % | 3102104985 | 32.19 % |
| Base Counts Overall C | 3786657028 | 19.65 % | 1565015978 | 16.24 % | 2221641050 | 23.05 % |
| Base Counts Overall G | 3860936547 | 20.03 % | 2256235402 | 23.41 % | 1604701145 | 16.65 % |
| Base Counts Overall T | 5690403025 | 29.52 % | 3107023882 | 32.24 % | 2583379143 | 26.80 % |
| Base Counts Overall N | 252532285 | 1.31 % | 126676169 | 1.31 % | 125856116 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 73718032 |
| Mapping Quality Histogram |
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| Insert Size Histogram |
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