/EXTERNAL BLUEPRINT/K010413_K010414_K010415_K010416_K010417_K010418_6_lane_gembs/EXTERNAL-K010413_1798655_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 89757842 | 100.00 % | 44878921 | 100.00 % | 44878921 | 100.00 % |
| General Reads | 86768544 | 96.67 % | 43722090 | 97.42 % | 43046454 | 95.92 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5 | 0.00 % | 3 | 0.00 % | 2 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2989293 | 3.33 % | 1156828 | 2.58 % | 1832465 | 4.08 % |
| Bisulfite_reads C2T | 44961286 | 50.09 % | 22651212 | 50.47 % | 22310074 | 49.71 % |
| Bisulfite_reads G2A | 41807263 | 46.58 % | 21070881 | 46.95 % | 20736382 | 46.21 % |
| Concept | Value |
|---|---|
| Unique Fragments | 32866327 |
| Average Unique | 73.23 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2480595437 | 36.36 % | 958134451 | 28.09 % | 1522460986 | 44.64 % |
| Base Counts Overall C | 885790396 | 12.99 % | 82096734 | 2.41 % | 803693662 | 23.56 % |
| Base Counts Overall G | 939317049 | 13.77 % | 829929350 | 24.33 % | 109387699 | 3.21 % |
| Base Counts Overall T | 2421786516 | 35.50 % | 1495639428 | 43.85 % | 926147088 | 27.15 % |
| Base Counts Overall N | 94106594 | 1.38 % | 44998033 | 1.32 % | 49108561 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 40826617 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 44878921 |
| 75 | 44878921 |
| Insert Size Histogram |
|---|
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