/EXTERNAL BLUEPRINT/K010413_K010414_K010415_K010416_K010417_K010418_6_lane_gembs/EXTERNAL-K010414_1798656_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 15196766 | 100.00 % | 7598383 | 100.00 % | 7598383 | 100.00 % |
| General Reads | 11013103 | 72.47 % | 5569155 | 73.29 % | 5443948 | 71.65 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 10 | 0.00 % | 5 | 0.00 % | 5 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4183653 | 27.53 % | 2029223 | 26.71 % | 2154430 | 28.35 % |
| Bisulfite_reads C2T | 5688776 | 37.43 % | 2875788 | 37.85 % | 2812988 | 37.02 % |
| Bisulfite_reads G2A | 5324337 | 35.04 % | 2693372 | 35.45 % | 2630965 | 34.63 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4252294 |
| Average Unique | 55.96 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 366606494 | 31.74 % | 153122277 | 26.52 % | 213484217 | 36.97 % |
| Base Counts Overall C | 195565005 | 16.93 % | 59778433 | 10.35 % | 135786572 | 23.51 % |
| Base Counts Overall G | 209162563 | 18.11 % | 141446918 | 24.49 % | 67715645 | 11.73 % |
| Base Counts Overall T | 367707863 | 31.84 % | 215510939 | 37.32 % | 152196924 | 26.36 % |
| Base Counts Overall N | 15912291 | 1.38 % | 7618541 | 1.32 % | 8293750 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5283709 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 7598383 |
| 75 | 7598383 |
| Insert Size Histogram |
|---|
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