/EXTERNAL BLUEPRINT/K010413_K010414_K010415_K010416_K010417_K010418_6_lane_gembs/EXTERNAL-K010415_1798657_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 15315098 | 100.00 % | 7657549 | 100.00 % | 7657549 | 100.00 % |
| General Reads | 12309537 | 80.38 % | 6229594 | 81.35 % | 6079943 | 79.40 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12 | 0.00 % | 6 | 0.00 % | 6 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3005549 | 19.62 % | 1427949 | 18.65 % | 1577600 | 20.60 % |
| Bisulfite_reads C2T | 6369877 | 41.59 % | 3222372 | 42.08 % | 3147505 | 41.10 % |
| Bisulfite_reads G2A | 5939672 | 38.78 % | 3007228 | 39.27 % | 2932444 | 38.29 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4739730 |
| Average Unique | 61.90 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 376669831 | 32.36 % | 157260167 | 27.02 % | 219409664 | 37.70 % |
| Base Counts Overall C | 189053703 | 16.24 % | 54272428 | 9.33 % | 134781275 | 23.16 % |
| Base Counts Overall G | 204075750 | 17.53 % | 140249072 | 24.10 % | 63826678 | 10.97 % |
| Base Counts Overall T | 378107556 | 32.48 % | 222514548 | 38.23 % | 155593008 | 26.74 % |
| Base Counts Overall N | 16040608 | 1.38 % | 7677509 | 1.32 % | 8363099 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5892947 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 7657549 |
| 75 | 7657549 |
| Insert Size Histogram |
|---|
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