/EXTERNAL BLUEPRINT/K010413_K010414_K010415_K010416_K010417_K010418_6_lane_gembs/EXTERNAL-K010416_1798658_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18791332 | 100.00 % | 9395666 | 100.00 % | 9395666 | 100.00 % |
| General Reads | 15691957 | 83.51 % | 7943724 | 84.55 % | 7748233 | 82.47 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12 | 0.00 % | 3 | 0.00 % | 9 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3099363 | 16.49 % | 1451939 | 15.45 % | 1647424 | 17.53 % |
| Bisulfite_reads C2T | 8118780 | 43.20 % | 4108659 | 43.73 % | 4010121 | 42.68 % |
| Bisulfite_reads G2A | 7573189 | 40.30 % | 3835068 | 40.82 % | 3738121 | 39.79 % |
| Concept | Value |
|---|---|
| Unique Fragments | 6012182 |
| Average Unique | 63.99 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 479580012 | 33.58 % | 194380782 | 27.22 % | 285199230 | 39.94 % |
| Base Counts Overall C | 216169213 | 15.14 % | 47110257 | 6.60 % | 169058956 | 23.68 % |
| Base Counts Overall G | 232971393 | 16.31 % | 176072977 | 24.66 % | 56898416 | 7.97 % |
| Base Counts Overall T | 479730601 | 33.59 % | 287086626 | 40.20 % | 192643975 | 26.98 % |
| Base Counts Overall N | 19690013 | 1.38 % | 9419974 | 1.32 % | 10270039 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 7489325 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 9395666 |
| 75 | 9395666 |
| Insert Size Histogram |
|---|
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