/EXTERNAL BLUEPRINT/K010413_K010414_K010415_K010416_K010417_K010418_6_lane_gembs/EXTERNAL-K010417_1798659_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 18547568 | 100.00 % | 9273784 | 100.00 % | 9273784 | 100.00 % |
| General Reads | 13722873 | 73.99 % | 6951708 | 74.96 % | 6771165 | 73.01 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 1 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4824694 | 26.01 % | 2322075 | 25.04 % | 2502619 | 26.99 % |
| Bisulfite_reads C2T | 7092012 | 38.24 % | 3591848 | 38.73 % | 3500164 | 37.74 % |
| Bisulfite_reads G2A | 6630862 | 35.75 % | 3359861 | 36.23 % | 3271001 | 35.27 % |
| Concept | Value |
|---|---|
| Unique Fragments | 5115909 |
| Average Unique | 55.17 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 476719570 | 33.82 % | 190308771 | 27.00 % | 286410799 | 40.64 % |
| Base Counts Overall C | 216537391 | 15.36 % | 48091340 | 6.82 % | 168446051 | 23.90 % |
| Base Counts Overall G | 233239376 | 16.55 % | 176978155 | 25.11 % | 56261221 | 7.98 % |
| Base Counts Overall T | 463703057 | 32.90 % | 280131684 | 39.75 % | 183571373 | 26.05 % |
| Base Counts Overall N | 19415774 | 1.38 % | 9297634 | 1.32 % | 10118140 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 6453050 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 9273784 |
| 75 | 9273784 |
| Insert Size Histogram |
|---|
 |