/EXTERNAL BLUEPRINT/K010413_K010414_K010415_K010416_K010417_K010418_6_lane_gembs/EXTERNAL-K010418_1798660_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 37735698 | 100.00 % | 18867849 | 100.00 % | 18867849 | 100.00 % |
| General Reads | 32959823 | 87.34 % | 16653861 | 88.27 % | 16305962 | 86.42 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22 | 0.00 % | 14 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4775853 | 12.66 % | 2213974 | 11.73 % | 2561879 | 13.58 % |
| Bisulfite_reads C2T | 17069171 | 45.23 % | 8622227 | 45.70 % | 8446944 | 44.77 % |
| Bisulfite_reads G2A | 15890674 | 42.11 % | 8031648 | 42.57 % | 7859026 | 41.65 % |
| Concept | Value |
|---|---|
| Unique Fragments | 12573215 |
| Average Unique | 66.64 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 972981675 | 33.93 % | 393572009 | 27.45 % | 579409666 | 40.41 % |
| Base Counts Overall C | 428884614 | 14.95 % | 94704616 | 6.60 % | 334179998 | 23.30 % |
| Base Counts Overall G | 456713804 | 15.92 % | 345954647 | 24.13 % | 110759157 | 7.72 % |
| Base Counts Overall T | 969801320 | 33.82 % | 580807529 | 40.50 % | 388993791 | 27.13 % |
| Base Counts Overall N | 39531635 | 1.38 % | 18917723 | 1.32 % | 20613912 | 1.44 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 15682545 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 18867849 |
| 75 | 18867849 |
| Insert Size Histogram |
|---|
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