/EXTERNAL BLUEPRINT/K011940_K011941_K011942_K011943_K011946_5_lane_gembs/EXTERNAL-K011943_1894885_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 15345996 | 100.00 % | 7672998 | 100.00 % | 7672998 | 100.00 % |
| General Reads | 12318691 | 80.27 % | 6215516 | 81.01 % | 6103175 | 79.54 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1 | 0.00 % | 1 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3027304 | 19.73 % | 1457481 | 18.99 % | 1569823 | 20.46 % |
| Bisulfite_reads C2T | 6362331 | 41.46 % | 3210088 | 41.84 % | 3152243 | 41.08 % |
| Bisulfite_reads G2A | 5956361 | 38.81 % | 3005429 | 39.17 % | 2950932 | 38.46 % |
| Concept | Value |
|---|---|
| Unique Fragments | 4711502 |
| Average Unique | 61.40 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 389436082 | 33.39 % | 160602542 | 27.54 % | 228833540 | 39.24 % |
| Base Counts Overall C | 185761582 | 15.93 % | 47947439 | 8.22 % | 137814143 | 23.63 % |
| Base Counts Overall G | 193950248 | 16.63 % | 141846203 | 24.32 % | 52104045 | 8.93 % |
| Base Counts Overall T | 381123780 | 32.68 % | 224985294 | 38.58 % | 156138486 | 26.78 % |
| Base Counts Overall N | 16024004 | 1.37 % | 7766370 | 1.33 % | 8257634 | 1.42 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 5909354 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 75 | 7672998 |
| 75 | 7672998 |
| Insert Size Histogram |
|---|
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