/EXTERNAL BLUEPRINT/K011948_K011949_K011950_K011951_K011952_K011953_K011954_K011955_K011971_9_lane_gembs/EXTERNAL-K011948_1894890_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 28645778 | 100.00 % | 14322889 | 100.00 % | 14322889 | 100.00 % |
| General Reads | 22276290 | 77.76 % | 11209842 | 78.27 % | 11066448 | 77.26 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6369488 | 22.24 % | 3113047 | 21.73 % | 3256441 | 22.74 % |
| Bisulfite_reads C2T | 11523401 | 40.23 % | 5796425 | 40.47 % | 5726976 | 39.98 % |
| Bisulfite_reads G2A | 10752889 | 37.54 % | 5413417 | 37.80 % | 5339472 | 37.28 % |
| Concept | Value |
|---|---|
| Unique Fragments | 8608021 |
| Average Unique | 60.10 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 699366820 | 31.71 % | 301212103 | 27.31 % | 398154717 | 36.10 % |
| Base Counts Overall C | 386409477 | 17.52 % | 134588460 | 12.20 % | 251821017 | 22.83 % |
| Base Counts Overall G | 393442522 | 17.84 % | 255215607 | 23.14 % | 138226915 | 12.53 % |
| Base Counts Overall T | 697383675 | 31.62 % | 397371612 | 36.03 % | 300012063 | 27.20 % |
| Base Counts Overall N | 29122412 | 1.32 % | 14474671 | 1.31 % | 14647741 | 1.33 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 10594448 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 14322889 |
| 76 | 14322889 |
| Insert Size Histogram |
|---|
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